 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016483746.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
AP2 |
| Protein Properties |
Length: 376aa MW: 42344.6 Da PI: 8.1873 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016483746.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 49 | 1.5e-15 | 51 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g
XP_016483746.1 51 SIYRGVTRHRWTGRYEAHLWDkNCWNEtqnKKgRQVYLGAYDDEETAAHAYDLAALKYWG 110
57*******************999966656446*************************98 PP
|
| 2 | AP2 | 51.7 | 2.1e-16 | 153 | 204 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++++grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
XP_016483746.1 153 SKYRGVARHHNNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 204
89****************99966...3.6*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0040008 | Biological Process | regulation of growth |
| GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process |
| GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
| GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MAKTSKSNQK NGTTTTTSSS SSSNKGHGNA IGKAKRTRKS VPRDSPPQRS SIYRGVTRHR 60
WTGRYEAHLW DKNCWNETQN KKGRQVYLGA YDDEETAAHA YDLAALKYWG QDTVLNFPVL 120
TYEKELKEME AQSKEGYIGS LRRKSNGFSR GVSKYRGVAR HHNNGRWEAR IGRVFGNKYL 180
YLGTYATQEE AATAYDMAAI EYRGLNAVTN FDLSRYVKWL RPSNQTNSNI ITTNNPSDNT 240
EPNPNPNADD IHSMPNTKEK MEFSFLQQQQ QQQQQSSNSD STAVALPCPA ASATASSALG 300
LLLQSSKFKE MLERTSASDC PETPPEPDRP RRSFPDDIQT YFDCQESSSF IEEHNIIFGD 360
LDSFASPNMF QCELDS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
