PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016483213.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 357aa    MW: 40617.2 Da    PI: 6.8776
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016483213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.22.8e-22141473128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      GfrF+Ptdeel+ +yL k v+ k++++ ++i+  d+y   +Pwd+  +++ ++++++ yf +k ++++a g+r +r  +  g Wk   k+k+v+
  XP_016483213.1  14 LGFRFRPTDEELI-RYLLKFVSCKSFSF-DHIRVEDLYGNkKPWDIFeNNFLGDDTKVnYFITKLKRTKAGGSRFSRgLIGGGCWKGLDKHKPVF 106
                     6************.9***********99.88*****996549****6455555556554999999************999*************** PP

             NAM  94 skkgelvglkktLvfy......kgrapkge.....ktdWvmheyrl 128
                     + +++lvg kk++ +       +++    +     +  W m+ey+l
  XP_016483213.1 107 N-GSKLVGFKKSFRYLekdsrtEKS----VdqgikNIVWNMKEYSL 147
                     *.9*************443332222....123333668******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.90812174IPR003441NAC domain
SuperFamilySSF1019412.88E-2412174IPR003441NAC domain
PfamPF023659.9E-1315147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MTISSHNYGP YPVLGFRFRP TDEELIRYLL KFVSCKSFSF DHIRVEDLYG NKKPWDIFEN  60
NFLGDDTKVN YFITKLKRTK AGGSRFSRGL IGGGCWKGLD KHKPVFNGSK LVGFKKSFRY  120
LEKDSRTEKS VDQGIKNIVW NMKEYSLNDN TVKVLRQRNI IQHEAYVLCC IKRKSVHAND  180
HKELGDHMEI ADSGNNVVAV MNTMLSTTQE HDYVTNSSED QGTGVHDLCP SNQFSSSEHN  240
NAFDQLQLVD VQAQNIEELA PSVQSHVESV GSSSTTSNQF TYYSPDNNGF QLQQYHSNIE  300
CDDRATVPST LAEIMNNIDH VDMKVYEYLG SLLAEKSNTA EPSXKIKYCR TPVAYLH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016483213.10.0PREDICTED: NAC domain-containing protein 76-like
TrEMBLA0A1S4B3450.0A0A1S4B345_TOBAC; NAC domain-containing protein 76-like
STRINGXP_009798779.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-23NAC domain containing protein 2