PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016481687.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 286aa    MW: 31693.7 Da    PI: 9.8759
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016481687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-202979256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  XP_016481687.1 29 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 79
                    799******.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.97E-322986No hitNo description
SuperFamilySSF541713.53E-202986IPR016177DNA-binding domain
SMARTSM003803.6E-372992IPR001471AP2/ERF domain
PfamPF008472.4E-152979IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-282986IPR001471AP2/ERF domain
PROSITE profilePS5103220.5082986IPR001471AP2/ERF domain
PRINTSPR003672.7E-73041IPR001471AP2/ERF domain
PRINTSPR003672.7E-75268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MAGTETTKTT TTTNTTKSSS HLNKSISRKF VGVRQRPSGR WVAEIKDSSQ RVRLWLGTYD  60
TPEEAARAYD EAARALRGEN ARTNFASTLS NSNSDHDQSI NMLQSNDSKH GLSFSSLKAK  120
LSKNLHSIMA RNSENKSSSK SRVSDHFTFA RIFHFKNNYH QYQSHHMDMK KIEKVVQPSI  180
RVLPHVTDNN NNNDLSSWEN SSVSDCSSEW TAFRQLGLDS DNGSVASEYF LGSDPMAGWV  240
SSPDIMSGGS SSSSSNEGSR SKRFKVSSSV IVPPTFSESP LRGDSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1429851471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009762762.10.0PREDICTED: ethylene-responsive transcription factor ERF010-like
RefseqXP_016481687.10.0PREDICTED: ethylene-responsive transcription factor ERF010-like
TrEMBLA0A1S4AYD10.0A0A1S4AYD1_TOBAC; ethylene-responsive transcription factor ERF010-like
TrEMBLA0A1U7V3G00.0A0A1U7V3G0_NICSY; ethylene-responsive transcription factor ERF010-like
STRINGXP_009762762.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17related to AP2 11