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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_016479504.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
HD-ZIP |
| Protein Properties |
Length: 206aa MW: 23852 Da PI: 5.2151 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016479504.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55.3 | 1.2e-17 | 17 | 70 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
+ ++++eq++ Le+ F +++++ e++ +L+++lg++ rq+++W+qNrRa++k+
XP_016479504.1 17 KKRLNQEQVKLLESSFDSTKKLEPEKKLQLSRELGVPPRQISIWYQNRRARWKN 70
56799***********************************************95 PP
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| 2 | HD-ZIP_I/II | 103.5 | 1.7e-33 | 16 | 107 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+k+rl++eqvklLE+sF++++kLepe+K +l+reLg+ prq+ +W+qnrRAR+k+++lE dy+aL+ ++++ +e+ +Leke+e+Lr el++
XP_016479504.1 16 NKKRLNQEQVKLLESSFDSTKKLEPEKKLQLSRELGVPPRQISIWYQNRRARWKNQNLEIDYNALQLKLETALSEKLQLEKETERLRGELQK 107
79*************************************************************************************99986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MNSQNLQKYQ SLPNHNKKRL NQEQVKLLES SFDSTKKLEP EKKLQLSREL GVPPRQISIW 60
YQNRRARWKN QNLEIDYNAL QLKLETALSE KLQLEKETER LRGELQKANQ MLIEINGERA 120
INIPLGDVSL SSYYEEGGSS SFHEDVISYN TTTWEIRKAV TMMKDIAVDL ERDERTEMVK 180
DLEAGVIQLL GASDECMHLS EAIQSI
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