PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016478412.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family EIL
Protein Properties Length: 665aa    MW: 74789 Da    PI: 6.2472
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016478412.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3433.52e-132404061350
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     eel++rmwkd+++lkrlker+k    +++ a++++k++++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWW
  XP_016478412.1  40 EELERRMWKDRVKLKRLKERQKLA--AQQ-AADKQKNKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWW 131
                     8*******************9963..355.59*************************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fd+ngpaai+ky+a++ + +++ ++  ++ + ++ l++lqD+tlgSLLs+lmqhcdppqr+fplekgv+pPWWPtG+e+ww+++gl+k q
  XP_016478412.1 132 KEKVKFDKNGPAAIAKYEAECRAKGEGVGN--QNGNPQSVLQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGVSPPWWPTGNEEWWAKMGLPKGQ 224
                     **********************99988888..57999999******************************************************* PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.......XXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.......slrkqspkvtl 276
                     + ppykkphdlkk++kv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l+vl++ee+ +++ s++  ss        +r +++k+ +
  XP_016478412.1 225 K-PPYKKPHDLKKMFKVGVLTAVIKHMSPDIAKIRRLVRQSKCLQDKMTAKESSIWLAVLSREESTIQQPSSDngSSsiseapnRTRGEKKKLSV 318
                     *.9*********************************************************************976335777876667799***** PP

                     XXXXXXXXXXXXXXX.XXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXX CS
            EIN3 277 sceqkedvegkkeskikhvqavktta.................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsis 350
                     ++++++dv+g ++ + + ++ +++ +                 +++   +r+ k  ++++ s+ + +++  ++q ++ e +++++d n+ +
  XP_016478412.1 319 DSDSDYDVDGVNDGNGSVSSRDERGNepsdarplnavpkshqgKEKGDGQRR-K--RKRARSNPQQTQLSLNNQQPDDEARNTLPDINNSN 406
                     *********8888777766666666688899999999988876333333333.2..22222222335789999999999999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.6E-12540287No hitNo description
Gene3DG3DSA:1.10.3180.102.9E-70164295IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.7E-60168290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 665 aa     Download sequence    Send to blast
MEYCMIDADG LGNSSDIEVD DIRCDNIEEK DVSDEEIDPE ELERRMWKDR VKLKRLKERQ  60
KLAAQQAADK QKNKQTTDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIAKYEA ECRAKGEGVG NQNGNPQSVL QDLQDATLGS  180
LLSSLMQHCD PPQRKFPLEK GVSPPWWPTG NEEWWAKMGL PKGQKPPYKK PHDLKKMFKV  240
GVLTAVIKHM SPDIAKIRRL VRQSKCLQDK MTAKESSIWL AVLSREESTI QQPSSDNGSS  300
SISEAPNRTR GEKKKLSVDS DSDYDVDGVN DGNGSVSSRD ERGNEPSDAR PLNAVPKSHQ  360
GKEKGDGQRR KRKRARSNPQ QTQLSLNNQQ PDDEARNTLP DINNSNMQFA GHITNESQPE  420
KDQPELQLRD SNLSVVPSTN AVSTEDAFIG NGPSIYPVLE NSEVVPYESR FHLGTQDSVV  480
QHQLHDTQLQ SRPQFSGVNN EPRSSIFHYV PPNNGLHNGP ENSVLHELQD PGFAHGSQYP  540
NLHQPHIYQY FTPSAEFVSA HDEQQSHLAF NEPQIKTKDS GVRSSVLHGN RNDVAREDHH  600
YGKDTFETDH DRPVEMHFAS PITSGSQDYA RLSSPFNFDL DVPGTLDTGD FELFLDEDVM  660
TFFAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-721672989140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1368373RRKRKR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754400.0HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016478412.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
SwissprotO231161e-179EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S4ANU50.0A0A1S4ANU5_TOBAC; ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
STRINGXP_009602831.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-162ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]