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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016475711.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
B3 |
Protein Properties |
Length: 301aa MW: 34825 Da PI: 9.771 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016475711.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 51.7 | 1.5e-16 | 85 | 174 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
f k +++s+v++ +l+lp+ f++ h ++ ++t+tl des ++++ k+ ++++ l++GW++F a++L egD++vF+l + + l+v
XP_016475711.1 85 FMKPMIRSNVTAGFWLSLPRFFCQLHL--PRHDTTVTLVDESQEEYKTKYLAERNG----LSGGWRGFSLAHNLVEGDVLVFQLFRFCR--LKVY 171
89*********************8884..35678****************555555....9**********************865233..4777 PP
EE- CS
B3 96 vfr 98
++r
XP_016475711.1 172 IVR 174
766 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MYLYLTFIFV YGQIKKTGPQ VMKDMSLGLQ GTHKQVFCKK SKKRRSCKKK MAMMQNLYGR 60 FDLASSAKYR AEEVQSRLST KYPSFMKPMI RSNVTAGFWL SLPRFFCQLH LPRHDTTVTL 120 VDESQEEYKT KYLAERNGLS GGWRGFSLAH NLVEGDVLVF QLFRFCRLKV YIVRANYLAE 180 VDAALVLLHL DAHQKQIDPV HQMQDNRSTK QAGIKRQRFS SQQEEDDYSA EENMLHKHSH 240 PRITFKDLDL PSKGLTYETL SIVDAVKASK INDPSSWNTR PTELEQLEIR SFSCGYSIEP 300 A
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975513 | 2e-62 | HG975513.1 Solanum lycopersicum chromosome ch01, complete genome. |