 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_016474800.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 369aa MW: 40567.9 Da PI: 10.0232 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016474800.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.9 | 1.3e-30 | 296 | 353 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+v+++tYegeH+h+
XP_016474800.1 296 DDFSWRKYGQKPIKGSPHPRGYYKCSSIrGCPARKHVERALDDPNVLIVTYEGEHDHP 353
99***********************9988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MAVDLMTTGY RNNNTSTSKM EENAMQEAAA GLQSVEKLIR LLSQSQSQNH SQKQKQSFQD 60
PSIKTNSTLD FSPDYLAVAD TAVNKFKKFI SLLDRTRTGH ARFRRGPITT TSPPVLPKVD 120
KEPELLCLPA PSQNRPVEEK LKTENPQAGS KIYCPTPIQR LPPLPLNHHH HHQLVKNGST 180
SERKESTTTI NFATPSPANS FISSLTGDTE SLQPSSMTSS GFQITNLSQV SSAGRPPLST 240
SSFKRNCSSM DDSAVKCSSA GGSSGRCHCP KKRKSKVKRV VRIPAISMKM ADIPPDDFSW 300
RKYGQKPIKG SPHPRGYYKC SSIRGCPARK HVERALDDPN VLIVTYEGEH DHPFSITETP 360
PAAIVLESS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
