 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016474421.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
Dof |
| Protein Properties |
Length: 276aa MW: 30319.5 Da PI: 8.9989 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016474421.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 123 | 1e-38 | 42 | 102 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
k++a++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rkn++ s
XP_016474421.1 42 KDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNRRCS 102
7899*****************************************************9976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MDTTQWTQDI GLVTSMAAEI APPNITCSRP SSPLEKKVRP QKDQAVNCPR CNSTNTKFCY 60
YNNYSLTQPR YFCKTCRRYW TEGGTLRNVP VGGGSRKNRR CSSSSLSLSS SSQNFPDSNP 120
NPSLSHQNPN YKINLGNSQD FNLGLPSITH DHNYFHSVPQ FLEFPKMDRG NNGNNQPLSS 180
TSSTTPISTT DLLRTGIASR GLTSFISTPT PDINALYTSS FLSGVQENGA KIMFPFGYLN 240
KQLSGTSAEA ENYNQSKGQE NSSAGYWNGM LGGGSW
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975522 | 2e-65 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |
