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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_016472446.1 |
| Common Name | WRKY3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 300aa MW: 34841 Da PI: 6.7375 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016472446.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 71.3 | 1.3e-22 | 124 | 185 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK++ +s++pr Y+rCt++ +C+++k+v+ +e+p + ++tY g+H ++
XP_016472446.1 124 VEDGCAWRKYGQKNILNSKYPRCYFRCTHKydqDCRATKQVQIIQENPIIYHTTYFGQHACN 185
58***************************99999*************************997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MKKPLVHENP RKNRVIKELV DGKRFATQLQ TLLQQPIADH GPVSADELLL KIWRSFSEAI 60
TELNTWGLAF QIEEVDQADS GDRKSKDSTS ELKKKKDKQG GKDRRGCYKR RKTSGSWMRE 120
SATVEDGCAW RKYGQKNILN SKYPRCYFRC THKYDQDCRA TKQVQIIQEN PIIYHTTYFG 180
QHACNSLKIT KHEMMIISQS NHNPMVEMES PPFEIKPKLP NSDAIHDSTV KEEDQESNKV 240
QRDDVSNDVS STMDSNLWQN FAHDSIMADH SSYFERIISS DMEDFDKFSD FHFDEAIEFS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 93 | 111 | KKKDKQGGKDRRGCYKRRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF193770 | 0.0 | AF193770.1 Nicotiana tabacum DNA-binding protein 3 (WRKY3) mRNA, complete cds. |
