 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016471190.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
LBD |
| Protein Properties |
Length: 200aa MW: 23031.1 Da PI: 4.7775 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016471190.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 113.9 | 1e-35 | 11 | 111 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
aCaaCk++r+kC ++C lapyfp++++++f+nv +lFG++n +kll+++ ++++e+++++l+ eA+++ ++PvyG++g+ +kl+ ++e ++el+
XP_016471190.1 11 ACAACKHQRKKCDENCQLAPYFPSNRSEDFQNVYRLFGVNNTIKLLNSVADDQKEKTAETLILEAKVWKENPVYGCLGIERKLRAEIEAYEKELE 105
7********************************************************************************************** PP
DUF260 96 llkeel 101
++++++
XP_016471190.1 106 MVRKQI 111
*99986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MNADMLMFVG ACAACKHQRK KCDENCQLAP YFPSNRSEDF QNVYRLFGVN NTIKLLNSVA 60
DDQKEKTAET LILEAKVWKE NPVYGCLGIE RKLRAEIEAY EKELEMVRKQ ISFCKEMATL 120
QMQRQQLEEQ LDRSSLALVS PFDVPYHDKK NEAIFMSDTK NFYGYKYDST NLDEVANVEC 180
IAIQGADFDH PAFVEPESAR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 5e-22 | 12 | 111 | 12 | 111 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 5e-22 | 12 | 111 | 12 | 111 | LOB family transfactor Ramosa2.1 |
