 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016469716.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
G2-like |
| Protein Properties |
Length: 333aa MW: 36341.5 Da PI: 4.8492 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016469716.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 108.8 | 2.8e-34 | 250 | 304 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
XP_016469716.1 250 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 304
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MEARPVAVQS VVASQLSNCG ASGVLSSSSF PMLPTVLGEK YPLLPDSQQA STEKELKQHP 60
GTFVSHLPSN SGAVGLMFSS SSGFSADLHF SSVRPQENHS GPAPFISQSI NSETSILLPH 120
SGVLQSTASS QYLNENNEPW CIDPLPDFLD YSMNTPVQNS QLACSNKQSD WQEWADLVIN 180
EEDALTSNWN EIMADTSLAE TEVKMQYQEE KQPSNFPMQQ VQTSQQIPAV AVENSAIAPA 240
SSPASGAATK QRMRWTPELH EAFVEAVNKL GGSERATPKG VLKLMKVEGL TIYHVKSHLQ 300
KYRTARYKPE ASEESSEKKH SSIDDLSSLD LKT
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-33 | 250 | 308 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975448 | 1e-180 | HG975448.1 Solanum pennellii chromosome ch09, complete genome. |
