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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_016469456.1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
LBD |
| Protein Properties |
Length: 250aa MW: 27531.5 Da PI: 8.7085 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016469456.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 124.2 | 6.4e-39 | 60 | 160 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+C aCk+lrrkC+++C++apyf ++q +++fa+vhk+FGasn +kll ++p ++r da+ +l+yeA ar+rdP+yG+v++i++lqqq+ +l+ael
XP_016469456.1 60 PCGACKFLRRKCVRGCIFAPYFDSDQgTAHFAAVHKVFGASNASKLLLRIPAHKRLDAVVTLCYEALARVRDPIYGCVAHIFTLQQQVVSLQAEL 154
7***********************9989******************************************************************* PP
DUF260 95 allkee 100
a+++++
XP_016469456.1 155 AYVQAR 160
**9976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 250 aa
Download sequence Send
to blast |
MSQLRTPSKP ANFANAKDTS YLRPWAIPVT FAIARKGHIC DITIARKCRI CDQGAGGSGP 60
CGACKFLRRK CVRGCIFAPY FDSDQGTAHF AAVHKVFGAS NASKLLLRIP AHKRLDAVVT 120
LCYEALARVR DPIYGCVAHI FTLQQQVVSL QAELAYVQAR LSTLQHLPMR QGPEPQSPIT 180
PTALQSSSDI FCTTSSISSS SNNMEYPQFD ITAGLSDSFD DQELENFELH TLAREFVSRH 240
LPGVRFRPSP
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