PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016469110.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 164aa    MW: 19354.3 Da    PI: 7.2707
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016469110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM576.5e-18712114128
             NAM  14 lvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWk.atgkdkevlskkgelvglkkt 105
                     l+ + L++k ++++l++ + +  ++i+++ P+d+   ++++ + ke+y  ++r++ y    r+ r +++gyWk  +  d ++l  ++ +vg+k+ 
  XP_016469110.1   7 LI-QQLNNKFKNQPLSI-DRLIFANINDFSPQDFFqGEINGgGIKECYVLTPRRRLYGIMPRPDRRARNGYWKlLKCIDDNILG-TDGTVGMKQK 98 
                     44.569999999**999.667788**********63455553667****************************44556999998.8889****** PP

             NAM 106 LvfykgrapkgektdWvmheyrl 128
                     L f++g+ ++++kt+W+m ey+l
  XP_016469110.1  99 LLFFEGDPKQARKTHWCMIEYKL 121
                     *********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.2171148IPR003441NAC domain
PfamPF023651.6E-710121IPR003441NAC domain
SuperFamilySSF1019412.75E-2011146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MDMDRFLIQQ LNNKFKNQPL SIDRLIFANI NDFSPQDFFQ GEINGGGIKE CYVLTPRRRL  60
YGIMPRPDRR ARNGYWKLLK CIDDNILGTD GTVGMKQKLL FFEGDPKQAR KTHWCMIEYK  120
LRQHCCSITC DHNIGRLDDW VLCKVYEEYD PETLSFQMET MDIG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-17414626166Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016469110.11e-121PREDICTED: NAC domain-containing protein 72-like
TrEMBLA0A1S3ZXD41e-120A0A1S3ZXD4_TOBAC; NAC domain-containing protein 72-like
STRINGXP_009589729.11e-106(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1770934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.26e-22NAC family protein