 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016464713.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
Trihelix |
| Protein Properties |
Length: 253aa MW: 30490.7 Da PI: 6.586 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016464713.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 82 | 8.1e-26 | 35 | 117 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ qe+++ + +r em++++ ++k++k lWe ++ km+e+g++rs++qCk+kw+nl +ryk ++++e + ++++p++++l+
XP_016464713.1 35 QWSIQETKDFLMIRGEMDQNFMETKRNKLLWEVIATKMKEKGYNRSAEQCKCKWKNLVTRYKGCETMEAEA--L-RQQFPFYNELQ 117
7********************************************************************95..3.4589*****98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MEGQPNLYHQ HQFVSQQNLL NIDTGGVGGG DRFPQWSIQE TKDFLMIRGE MDQNFMETKR 60
NKLLWEVIAT KMKEKGYNRS AEQCKCKWKN LVTRYKGCET MEAEALRQQF PFYNELQAIF 120
MERMLRMEAE EEENDEDSEE EKGGNKKKRK LKGNTSSSSN VASGNLVGNL KEILDEFMNK 180
QMEMEMQWQK EYERREEERK IKEMEWRQKM EAVQNERLMM EKRWRKREEQ WKMREETRAE 240
KRDALITALL NKL
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may play a role in the induction of CAM4 in response to pathogen and salt. {ECO:0000269|PubMed:15310827}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By salt and infection with the bacterial pathogen P.syringae pv tomato. {ECO:0000269|PubMed:15310827}. |
