 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016462967.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 168aa MW: 19170.4 Da PI: 8.085 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016462967.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 110.4 | 2e-34 | 9 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrF+Ptdeelvv++L++k++ +++ ++i+++++y ++PwdL+ k+ a ++wyf+s+ + ++r+t +gyW+ g d+++ls
XP_016462967.1 9 LPPGFRFSPTDEELVVHFLQRKASLLPCHP-DIIPDLHLYPYDPWDLDaGKTMAVGNKWYFYSRITN-------ETRITGNGYWQPVGVDESILS 95
79*************************999.99**************9546666789*****99765.......5799****************9 PP
NAM 95 k.kgelvglkktLvfykg.rapkgektdWvmheyrl 128
+ +++++g+kk fy g + p+g+kt+W+m+eyrl
XP_016462967.1 96 SsNHKVIGTKKYYGFYMGdEPPQGHKTNWLMQEYRL 131
877888**********996789************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 168 aa
Download sequence Send
to blast |
MGDNNNVNLP PGFRFSPTDE ELVVHFLQRK ASLLPCHPDI IPDLHLYPYD PWDLDAGKTM 60
AVGNKWYFYS RITNETRITG NGYWQPVGVD ESILSSSNHK VIGTKKYYGF YMGDEPPQGH 120
KTNWLMQEYR LSHSSASTSS SNRSSSRRST THSTNYSKWV ICCRGEVT
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-28 | 6 | 162 | 14 | 160 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-28 | 6 | 162 | 14 | 160 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-28 | 6 | 162 | 14 | 160 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-28 | 6 | 162 | 14 | 160 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 3swm_B | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 3swm_C | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 3swm_D | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 3swp_A | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 3swp_B | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 3swp_C | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 3swp_D | 1e-28 | 5 | 162 | 16 | 163 | NAC domain-containing protein 19 |
| 4dul_A | 1e-28 | 6 | 162 | 14 | 160 | NAC domain-containing protein 19 |
| 4dul_B | 1e-28 | 6 | 162 | 14 | 160 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that influences tracheary elements and xylem development by negatively regulating secondary cell wall fiber synthesis and programmed cell death. {ECO:0000269|PubMed:18069942, ECO:0000269|PubMed:20458494}. |
