 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016461626.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 308aa MW: 33994.4 Da PI: 8.3707 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016461626.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.4 | 5e-18 | 141 | 195 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
XP_016461626.1 141 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 195
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 126 | 1.6e-40 | 141 | 231 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rl+keq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E d+e+Lkr++++l+een+rL+ke +eLr +lk
XP_016461626.1 141 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTELDCEYLKRCCEKLTEENRRLQKELQELR-ALK 231
69*************************************************************************************9.555 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MELALSLGGD TQKPFSFLEK STNNSSSHEE LLTGSNKDIR FCMGLGKSNP NIAAEPGLTN 60
GPERMVLDMN RRPIILAEEA EEGTDLSSPN SNSAVSSFQM EFSSIYRSGI SRSLIGKRDH 120
FEAGNTERGV SDEDENNGLA RKKLRLTKEQ SAFLEESFKE HNTLNPKQKL ALAKQLNLRP 180
RQVEVWFQNR RARTKLKQTE LDCEYLKRCC EKLTEENRRL QKELQELRAL KSSQPFYMQL 240
PATTLTMCPS CERVATTAAT AVPTAAAATT TSATATANAA ATNTTLSLAK PNLFPFPPAQ 300
IHPPQAAS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 189 | 197 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
