 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016450608.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
FAR1 |
| Protein Properties |
Length: 260aa MW: 29284 Da PI: 5.8298 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016450608.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 86.5 | 4e-27 | 91 | 177 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+Y++YA+++GF +r+++ ++s rnge ++r++vC+keg++++++++ + +r+ r gCka++ vkke++gkw+v+kl++eHnH+l+
XP_016450608.1 91 YYSTYATHLGFVMRVDAFRRSMRNGELVWRRLVCNKEGFSKSRQNQ--NGQRKCRAIREGCKAMIIVKKEQSGKWVVAKLVKEHNHPLV 177
8*****************************************9988..778888889******************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MDENNNATDD AEMVESSSGK ELTTNCVEAE GRLNMEPYVV DENNTTADDG EMVESSSGKE 60
LTRNGVEAEG RPNLEPYVGM EFESEEAAKA YYSTYATHLG FVMRVDAFRR SMRNGELVWR 120
RLVCNKEGFS KSRQNQNGQR KCRAIREGCK AMIIVKKEQS GKWVVAKLVK EHNHPLVVKP 180
ANTRIGSILC QTPDDKDVKI RELTAELQKE RKRSAVLQEQ LAMVLKDMED HSDQLSKNIN 240
DIVKSVKELE SRKIVSPNGG
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975448 | 1e-143 | HG975448.1 Solanum pennellii chromosome ch09, complete genome. |
| GenBank | HG975521 | 1e-143 | HG975521.1 Solanum lycopersicum chromosome ch09, complete genome. |
