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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_016441945.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 344aa MW: 39104.6 Da PI: 4.7563 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016441945.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 170.9 | 4e-53 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelv +yLk+k+++ ++el evi+ +d+yk++Pw+Lp k + +++ ewyfF++rdkky++g+r+nratk gyWkatgkd++v+
XP_016441945.1 6 LPPGFRFHPTDEELVGYYLKRKTDELEIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWYFFCPRDKKYPNGSRTNRATKCGYWKATGKDRKVV 99
79****************************.99**************95344555788************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ k ++vg +ktLvfy+grap g +tdWvmheyrl
XP_016441945.1 100 C-KPAVVGYRKTLVFYRGRAPLGDRTDWVMHEYRL 133
*.9999***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MGGTSLPPGF RFHPTDEELV GYYLKRKTDE LEIELEVIPV IDLYKFDPWE LPEKSFLPKR 60
DMEWYFFCPR DKKYPNGSRT NRATKCGYWK ATGKDRKVVC KPAVVGYRKT LVFYRGRAPL 120
GDRTDWVMHE YRLCDDVSQG TPSFQGPFAL CRVIKRKDIS SKTSDVRRET TSKQDECSSS 180
NEAFTSAVTS NEPLVLSDDM PSTQTTYTCN DSNYSTPINS PYQTTQIGEC ESAMGTNAAN 240
LCMSQNMILD PAKECTSGQS ICGKYPLYDF PNLTSWQPND QYDFTSSSSF PNFRGEVELS 300
GDLSGYGFAP PFSDDGNYME FYRNEDISYK GYNQNNLFGN PDLL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-51 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-51 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-51 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-51 | 5 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-51 | 5 | 162 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-51 | 5 | 162 | 16 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor involved in tissue reunion of wounded inflorescence stems. Required for the division of pith cells in the reunion process, which is dependent on polar-transported auxin and the wound-inducible hormones ethylene and jasmonate (PubMed:21911380). Binds to the promoters of XTH19 and XTH20 to induce their expression via auxin signaling. XTH19 and XTH20 are involved in cell proliferation in the tissue reunion process of incised stems (PubMed:25182467). Involved in hypocotyl graft union formation. Required for the auxin- mediated promotion of vascular tissue proliferation during hypocotyl graft attachment (PubMed:27986917). {ECO:0000269|PubMed:21911380, ECO:0000269|PubMed:25182467, ECO:0000269|PubMed:27986917}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by wounding in the flowering stem. {ECO:0000269|PubMed:21911380}. |
