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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016441621.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
HD-ZIP |
Protein Properties |
Length: 256aa MW: 28534.1 Da PI: 8.5914 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016441621.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 56.5 | 4.6e-18 | 105 | 159 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq +Le+ F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k
XP_016441621.1 105 RKKLRLTKEQSAVLEDSFKEHSTLNSKQKRNLATRLSLRPRQVEVWFQNRRARTK 159
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 119.6 | 1.7e-38 | 105 | 194 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rl+keq+++LE+sF+e+++L++++K +la++L l+prqv+vWFqnrRARtk+kq+E+d+e L+++y+ lk en+rL+ke +eL+ +l
XP_016441621.1 105 RKKLRLTKEQSAVLEDSFKEHSTLNSKQKRNLATRLSLRPRQVEVWFQNRRARTKLKQTEVDCEILRKCYEDLKGENRRLNKELQELK-SL 194
69*************************************************************************************9.44 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MICNTRLSLS LLGSSGESTT PKRKSNHQEL DINPFPSLTL CLSSSAVNSS VISAAVSSFS 60 NSSIKRERDA SFEEEVELDT NKVIISPKLD DVDQEQDEDH EFGTRKKLRL TKEQSAVLED 120 SFKEHSTLNS KQKRNLATRL SLRPRQVEVW FQNRRARTKL KQTEVDCEIL RKCYEDLKGE 180 NRRLNKELQE LKSLKMAAPF RVQLSAATLS MCPSCERTYG GGGGGDNSAT KISFSLGDQK 240 PNFYGSFANS SAALLS
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 103 | 109 | TRKKLRL |
2 | 153 | 161 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |