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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_016441195.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
NF-YA |
| Protein Properties |
Length: 305aa MW: 34165.9 Da PI: 7.8627 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016441195.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 103.1 | 2.6e-32 | 173 | 229 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
dep++VNaKQyq+Il+RR+ Rakle+++kl +k+rkpylheSRh+hAl+R+Rg+gGrF
XP_016441195.1 173 DEPIFVNAKQYQAILRRREYRAKLEAQNKL-SKGRKPYLHESRHRHALNRARGPGGRF 229
79****************************.**************************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
| GO:0009785 | Biological Process | blue light signaling pathway |
| GO:0010262 | Biological Process | somatic embryogenesis |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0016602 | Cellular Component | CCAAT-binding factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MISRMQDLLQ KGSDLSSVST GPSISVRPSW WTSKEPQMQQ WLTFPGPQNP EQFGFHFQDQ 60
DSSSTQSTGQ SCPEVATEGE SKIYGKSNMP FQAGYSKSIE KPDEAQSEST LSSHEHDCTY 120
QGNHKQIAYA PFAYSDPYCH GLLASYGQCS SVYPQMLGPI SARVPLPLDY QQDEPIFVNA 180
KQYQAILRRR EYRAKLEAQN KLSKGRKPYL HESRHRHALN RARGPGGRFL NMKKLLESGS 240
PDVTNVQGTP VSNALQLNRQ IMEPKVHQSK NFQESYSTPT CSGISNGSNC DDIDQQQPLN 300
YSAFS
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Involved in the blue light (BL) and abscisic acid (ABA) signaling pathways. {ECO:0000250, ECO:0000269|PubMed:17322342}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Gao W,Liu W,Zhao M,Li WX
NERF encodes a RING E3 ligase important for drought resistance and enhances the expression of its antisense gene NFYA5 in Arabidopsis.
Nucleic Acids Res., 2015. 43(1): p. 607-17
[PMID:25514924] - Zhao H, et al.
The Arabidopsis thaliana Nuclear Factor Y Transcription Factors.
Front Plant Sci, 2016. 7: p. 2045
[PMID:28119722] - Nasim Z,Fahim M,Ahn JH
Possible Role of MADS AFFECTING FLOWERING 3 and B-BOX DOMAIN PROTEIN 19 in Flowering Time Regulation of Arabidopsis Mutants with Defects in Nonsense-Mediated mRNA Decay.
Front Plant Sci, 2017. 8: p. 191
[PMID:28261246] - Du Q,Zhao M,Gao W,Sun S,Li WX
microRNA/microRNA* complementarity is important for the regulation pattern of NFYA5 by miR169 under dehydration shock in Arabidopsis.
Plant J., 2017. 91(1): p. 22-33
[PMID:28332758] - Huang KC,Lin WC,Cheng WH
Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
BMC Plant Biol., 2018. 18(1): p. 40
[PMID:29490615]
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