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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016436475.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GATA |
Protein Properties |
Length: 533aa MW: 59253.4 Da PI: 7.5601 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016436475.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 49.4 | 6.1e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+
XP_016436475.1 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGT 41
****************66666***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 533 aa
Download sequence Send
to blast |
MGKQGPCYHC GVTSTPLWRN GPPEKPILCN ACGSRWRTKG TLANYTPLHA RAEPDDFEDY 60 RVSRFKNSPV KNKEVKVLKR KKNHDNPEIG ILSDYNQGFH RKALDEDTSN RSSSGSAVSN 120 SESCAQFGSA EASDLTGPTQ SNIWEGMVPS KKRTCVGRPK QSSVEKLTKD LYTILHEQQC 180 SYWSGSSEED LLLESDKPMV SVEIGHGSVL IRHPSSLGRE EESEASSLSV DNKHHSSNEA 240 YSQLTTPPVH INKGVNSSNL VTERAKKLTG QDQIKRSKDQ LEKLQILGHH NSPLCHIDLK 300 DVLNYEEFIT HLSSDEQQQL LKYLPPVDSF SPPESLRSMF ESSHFEENLS SFQKLLAEGV 360 LDNSLSGVTV EDCRTLKRFT LCYLMKSKWV EQFNLLKDMK CKKGSSSSEV AGGPSVIGTG 420 HSGNMKRPRI GQHPKYSGVN TTMKSPKRVM LKSSYEQKEI IENDSSCFSP RSLFALPSEN 480 SFRFANESSD QDLLLDVPSN SSFPQAELLL PTANFAAQAS TSSSSVYPQL LRP
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975447 | 1e-131 | HG975447.1 Solanum pennellii chromosome ch08, complete genome. |