 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_016433123.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
GATA |
| Protein Properties |
Length: 326aa MW: 35747.7 Da PI: 4.6549 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016433123.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 50 | 3.9e-16 | 185 | 221 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg ++ Tp +Rrgp+g++tLCnaCGl+++ kg+
XP_016433123.1 185 CQHCGISEseTPAMRRGPSGPRTLCNACGLMWANKGM 221
*****99999***********************9996 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MEAANSRAIG FDEEYMNVAI RVDEYGGGGF DADDISGGCE SSGTEELQQV CSSMPPLAAS 60
PVVDSDGRVL AAMPMPSRRT SELTISFEGQ LYVFPAVTPD KSVDNDAPIR PNISRRIASL 120
IRFREKRKER CFEKKVRYTC RKEVAQRMHR KNGQFASLKD GEKTYAGNID SGDSIPHHEP 180
TLRRCQHCGI SESETPAMRR GPSGPRTLCN ACGLMWANKG MLRDITKGGR GTPFDKSEPR 240
TPDIKLPTVA PESSDQKQYQ EDMREAAENF VDNSPVGIGS SSADIDEEQD NLDELANASG 300
TEFEIPASFD EQIGIDSHMG ADWPGT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 5e-38 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
