 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_016433121.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
GATA |
| Protein Properties |
Length: 355aa MW: 38731.1 Da PI: 4.7165 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016433121.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 49.9 | 4.4e-16 | 214 | 250 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg ++ Tp +Rrgp+g++tLCnaCGl+++ kg+
XP_016433121.1 214 CQHCGISEseTPAMRRGPSGPRTLCNACGLMWANKGM 250
*****99999***********************9996 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MEAANSRAIG FDEEYMNVAI RVDEYGGGGF DADDISGGCE SSGTEELQQV CSSMPPLAAS 60
PVVDSDGRVL AAMPMPSRRT SELTISFEGQ LYVFPAVTPD KVQAILLLLG GSDMASYVPS 120
SHSLALQTTK SVDNDAPIRP NISRRIASLI RFREKRKERC FEKKVRYTCR KEVAQRMHRK 180
NGQFASLKDG EKTYAGNIDS GDSIPHHEPT LRRCQHCGIS ESETPAMRRG PSGPRTLCNA 240
CGLMWANKGM LRDITKGGRG TPFDKSEPRT PDIKLPTVAP ESSDQKQYQE DMREAAENFV 300
DNSPVGIGSS SADIDEEQDN LDELANASGT EFEIPASFDE QIGIDSHMGA DWPGT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 6e-38 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
