PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015902857.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 307aa    MW: 35268.8 Da    PI: 7.177
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015902857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.32.7e-22133193259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg +WrKYGqK++ ++e+pr+Y+rCt++   gC+++k+v+r + +p +  +tY g+H+++
  XP_015902857.1 133 DDGQAWRKYGQKVILQAEYPRHYFRCTYKydqGCKATKQVQRIQVNPPLYRTTYFGHHTCK 193
                     8***************************99999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.0E-23124194IPR003657WRKY domain
PROSITE profilePS5081120.185127195IPR003657WRKY domain
SuperFamilySSF1182901.96E-22127194IPR003657WRKY domain
SMARTSM007741.5E-34132194IPR003657WRKY domain
PfamPF031066.5E-22133193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MEGSWPENLA TINQKKVIND ELMEGREIAN KLRSLLSNSG DDSKSAKDLV IKIMKSFSNT  60
LSMLNVKEGD IAGSMISQIQ AHSSCLDASK SEGDSQESCR SSNITPIKKD RRSFHNRRRP  120
LQTWQSDTPT LIDDGQAWRK YGQKVILQAE YPRHYFRCTY KYDQGCKATK QVQRIQVNPP  180
LYRTTYFGHH TCKIIHKGHE VVMEDTNPIE TSIFISFDSS NLTNKQDQHP FLSSFSSIKD  240
ELKEDIKKCD TNKNQSYSCD YFVSPDSMVT QLPKSMMELS STLESKNKDL IYEIMECDDF  300
SFNMFQI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-21132193869OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015902857.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015902857.10.0probable WRKY transcription factor 70
TrEMBLA0A2P5CHL33e-81A0A2P5CHL3_PARAD; WRKY domain containing protein
STRINGXP_010098011.14e-77(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-38WRKY DNA-binding protein 70