PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015900686.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 498aa    MW: 53218.2 Da    PI: 6.1386
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015900686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30254312259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp++++itY++eHnh+
  XP_015900686.1 254 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRADPNMLVITYTSEHNHP 312
                     699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.902248314IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-30250314IPR003657WRKY domain
SuperFamilySSF1182904.18E-26251314IPR003657WRKY domain
SMARTSM007747.7E-38253313IPR003657WRKY domain
PfamPF031061.4E-25255312IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    Send to blast
MCSLYSLLRM ENYQGDLTDI VRASATGAYG VSEPPISSSS SSSDWQFPSS SSSSYPINFS  60
SSSMEDQHRD NYFGDPFSHM RDPLLHELYL PGTGFFSSPS SSEMISSSGV VVDETGSCTF  120
GGACASGTGS GSGMLAQSIV DDDMKRPAAA VAASSNIFSR MLQISPSAKL PASQCESPAA  180
ATAAAMAAAA AASSPRAINV NSSKGGCLVE NTGVQISSPR NPGIKRRKSQ AKQVVCIPAP  240
AAPNSRPSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRADPNM  300
LVITYTSEHN HPWPTQRNAL AGSTRSQPSK NNASSKSSPT TAGSHQLQKT STTSPKEEQR  360
DNINENNNNN ASPIVTAGSN STTSASIKEE IEDMEKQLEM VDDGEFSTDH HHQGFPYRPS  420
MPPDSNHSDQ DFFADLGEIE ADPLNLLFSQ AFGADHEQKG SKGLDPFNLF DWSADNNNKN  480
NNNNNSSNSA FGEAKRGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-23228315280Disease resistance protein RRS1
5w3x_D1e-23228315280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015900686.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015900686.10.0probable WRKY transcription factor 14
TrEMBLA0A2N9IRQ80.0A0A2N9IRQ8_FAGSY; Uncharacterized protein
STRINGXP_008225685.11e-171(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.11e-88WRKY DNA-binding protein 14