 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_015897287.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
|
| Family |
WRKY |
| Protein Properties |
Length: 315aa MW: 35731.3 Da PI: 6.907 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_015897287.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 66.9 | 3.2e-21 | 130 | 190 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg +WrKYGqK + ++++pr+Y+rC ++ gC+++k+v+r + +p + ++Y g+H++e
XP_015897287.1 130 NDGQAWRKYGQKAILNAKYPRHYFRCEYKndqGCKATKQVQRIQMNPPLYRTIYYGHHTCE 190
8**************************998889**************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MDGSWPENLD AIRKMAIEEL MKGRELANQL RCVLSKSDDS AGSVKNLLMK IMKSFSTTLS 60
ILNVKSSVIS QTQADFQVGL PCLVARNSED SQESCKSNTI TIPSKKNRRG CYERRTSLRT 120
WKRDTPTLIN DGQAWRKYGQ KAILNAKYPR HYFRCEYKND QGCKATKQVQ RIQMNPPLYR 180
TIYYGHHTCE DLKNPEMILE CNTSTNPTEN TSSIFISFDT SSLTNLKNVQ HHPFFSSIKQ 240
ECKEEKTSCD NEDHNQPPSL SSSDYFVSPD LMAAAGSPEQ PMKVLPSTQD FDHEGLVSGM 300
MEYVGLDLDD LHVEC
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6ir8_A | 6e-19 | 129 | 189 | 8 | 68 | OsWRKY45 |
