PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015892560.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 369aa    MW: 40735.4 Da    PI: 4.3468
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015892560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.53.7e-25208264259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vk+ + +rsYY+Ct+++C +kk +e++++ ++v+ei+Y+++H+h+
  XP_015892560.1 208 SDGYNWRKYGQKQVKSPKGSRSYYKCTYSECFAKK-IECCDHSGHVTEIVYKNQHTHD 264
                     7********************************98.*********************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.27202266IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-21205266IPR003657WRKY domain
SuperFamilySSF1182903.14E-20207266IPR003657WRKY domain
SMARTSM007742.3E-24207265IPR003657WRKY domain
PfamPF031061.3E-17209264IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MAEQQSFKAP EAENTKTTNE QVEEEEEPEE DDEDELEGGD EDDEEEAEEE EVGGDGGGEL  60
QVGEFQSSEQ LVEVEVKQSA VETLAVPSSE DDQRAVLLMN STSQSNAGAQ FEEQVTEPQP  120
EVLASVAPQD ARAKTENRQQ FSACPAPLSE LSPTSVTQSI SAAPSPTLLE QRLSPPKVTG  180
SCMLEADQHN SLDVKTLPSI PVLKSAASDG YNWRKYGQKQ VKSPKGSRSY YKCTYSECFA  240
KKIECCDHSG HVTEIVYKNQ HTHDPPRKSN CTRESKLSLA TERVLGNNVT EHQQSSRTLN  300
DSDPSTSSKE LTHETLPLPE RKRQNSITPE ENGDIKVKEE HGNEPEPKRR MKKSNVEYPG  360
SLLKPGYLG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015892560.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015892560.10.0probable WRKY transcription factor 32
TrEMBLM5W7R31e-117M5W7R3_PRUPE; Uncharacterized protein
STRINGEMJ052981e-118(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-43WRKY DNA-binding protein 32