PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891831.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 552aa    MW: 60686 Da    PI: 7.8434
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.6e-30292350259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+ae+++++++tYeg+Hnh+
  XP_015891831.1 292 NDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEEKSILITTYEGNHNHP 350
                     8*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-33276352IPR003657WRKY domain
SuperFamilySSF1182901.44E-27284352IPR003657WRKY domain
PROSITE profilePS5081129.39286352IPR003657WRKY domain
SMARTSM007747.6E-37291351IPR003657WRKY domain
PfamPF031061.2E-26292350IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    Send to blast
MENQRRQFMT FLRSGDFLPS NNPDRLIIQN PIHHHHAKPS NIVNEMDLFP TTTSTCSNKE  60
DDPNRHHVLH TLTNPISHPP PPSALVNTGL DLLTLNSGFS TSERKDKYDQ KSDIQLTNTL  120
QVELERLQQE NRKLKSMLDQ ITKNYNLLQA QLLVAMQKQP ARCHTLLEQK TEVSGMSSHA  180
KEFMEPQDLD VKDPRVCDGK RLARCETMEV MSKEMQHSTS HFDDGGGGGG GGGLDQSSQC  240
WGSPESPKYK SGEANQKQQQ QQQQHQQQPP DHLPFRKPRV SVRARSEAPL INDGCQWRKY  300
GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEEKSILI TTYEGNHNHP LPAAATAMAN  360
TTSAAASMLL SDSTTSMDHH HHHHNHNHHH HITLNKNSSS ASTALSFFPS SCINNSIPAY  420
ASSMPTLSAS APFPTITLDL THNHNPTHEL INRFPPLLSF PGPPRPLPLL GHPMYLKLPA  480
VVDTVTAAIA SDPNFTAALA AAISSTISGA NNDTNISLST ASGNNNVIAS STNGLPGSPD  540
QLPHSCTTFS TT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-21282353878Probable WRKY transcription factor 4
2lex_A2e-21282353878Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00115ampDAPTransfer from AT4G01720Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015891831.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891831.10.0probable WRKY transcription factor 47 isoform X3
TrEMBLA0A386IP510.0A0A386IP51_ZIZJJ; WRKY transcription factor 62
STRINGEOX954651e-138(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01720.16e-67WRKY family protein