PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891699.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 289aa    MW: 32200.5 Da    PI: 5.0859
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891699.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.2e-3055113259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YY+C+++ gC++kk+ver+++d +v++itY+++Hnh+
  XP_015891699.1  55 SDFWSWRKYGQKPIKGSPYPRGYYKCSTSkGCSAKKQVERCRTDASVLIITYTSSHNHP 113
                     699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-3145115IPR003657WRKY domain
SuperFamilySSF1182902.09E-2551115IPR003657WRKY domain
SMARTSM007746.5E-3554114IPR003657WRKY domain
PROSITE profilePS5081130.89455115IPR003657WRKY domain
PfamPF031061.2E-2456113IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MDDSLSPKLD SEVNPKDLGK ETQASKRNKK MIQKTVVTVK LGTNVGKQKN EGPPSDFWSW  60
RKYGQKPIKG SPYPRGYYKC STSKGCSAKK QVERCRTDAS VLIITYTSSH NHPGPDISTT  120
ANLADQPPPK PNQVNNEELP ALSPKEEQQK QQQEHEQGQG NKKEQTSTNN ATTTTTASED  180
AGEDTFYYIQ SPISCSRDII MDQEEDPFTG NLGKTHTHHQ TLGNFVLDEE PLSYSQLMCF  240
STPSKLSEEN DFFDELEELP TSSSSSFTSY MGMRSNNNLS EDMIPVVPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-20561151879Disease resistance protein RRS1
5w3x_D3e-20561151879Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015891699.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891699.10.0probable WRKY transcription factor 35
TrEMBLM5VMY21e-103M5VMY2_PRUPE; Uncharacterized protein
STRINGEMJ025641e-103(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.19e-36WRKY DNA-binding protein 65