PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015890203.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family BES1
Protein Properties Length: 318aa    MW: 34005.9 Da    PI: 9.4845
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015890203.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822223.93.3e-6951481148
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqGnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  +e+ag+ +++s +ss+q
  XP_015890203.1   5 GSSGRLPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKPP-PTEIAGTLTNISACSSVQ 98 
                     689*************************************************************************.9***************** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
                      s++ss+++spv+sy+asp+sssfpsp+++d ++++    llp+l++ ++++ 
  XP_015890203.1  99 PSPQSSSFPSPVPSYHASPSSSSFPSPTRFDGNPSS---YLLPFLRNIASIPT 148
                     *********************************985...89999999887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.4E-656130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MTAGGSSGRL PTWKERENNK RRERRRRAIA AKIYTGLRAQ GNYKLPKHCD NNEVLKALCA  60
EAGWIVEEDG TTYRKGCKPP PTEIAGTLTN ISACSSVQPS PQSSSFPSPV PSYHASPSSS  120
SFPSPTRFDG NPSSYLLPFL RNIASIPTNL PPLRISNSAP VTPPISSPTS RGSKPKPDWE  180
SLSNGSLNSL HHPFFATSAP ASPTRRHHLT PATIPECDES DASTVDSCRW VSFQTGAASA  240
APPSPTFNLM KPAVARPNSL HGTVNGHGGI GWGGTAERGR GAEFEFESGK VKAWEGEKIH  300
DIGVDDLELT LGSAKNRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-31987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015890203.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015890203.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A431e-115BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLM5VR331e-167M5VR33_PRUPE; Uncharacterized protein
STRINGXP_009349751.11e-173(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-89BES1 family protein