 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_015888894.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family |
bHLH |
Protein Properties |
Length: 437aa MW: 48732.4 Da PI: 5.9728 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_015888894.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.2 | 6.9e-14 | 223 | 274 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A++++k+L+
XP_015888894.1 223 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 274
79****************************...9******************995 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MERLQGPINP CFFGDHLDVE CLEQGLSSSA GTWRFEEEEE EEAQLSIPGL DDRMPFLQML 60 QSVESPAPFF PLKEPSFQAL LRLQHLKKPW ELGNSFNMPQ METQIQALEL ESCVTQHIDF 120 VEELHSPIKS EANKDVNNQH HHPHSTEGVS SECNQEQQPS SVENNSASNG SVSASTWARA 180 QAQTHPQNAP KQIHSSKSLP VTRERRKRKR IRPAKNKEEV ESQRMTHIAV ERNRRRQMND 240 HLNVLRSLMP TSYIQRGDQA SIVGGAIDFV KELEQLLQTL EAQKKMRKSE GGGGSNNGSD 300 TPASSSSSSA MAVASNGMFM SLSQYKIGSE ESNNNNNNNN GDEVTAENKS EAADIEVTVI 360 QTHVNLKIQC PRRPGQLLKA IVALEDLRLS ILHLNINTSH STVLYSFNLK IEDGCKLGSA 420 DEIAGAVHQI FRYMESS
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 204 | 209 | RRKRKR |
2 | 223 | 234 | RMTHIAVERNRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP689430 | 3e-87 | KP689430.1 Prunus pseudocerasus isolate Unigene20562 bHLH transcription factor mRNA, complete cds. |