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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_015881750.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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| Family |
C2H2 |
| Protein Properties |
Length: 360aa MW: 40527.2 Da PI: 7.5399 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_015881750.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 21.1 | 8.5e-07 | 199 | 218 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C+k+F+r nL+ H+
XP_015881750.1 199 FSCPVCSKTFNRYNNLQMHM 218
89*****************9 PP
|
| 2 | zf-C2H2 | 12.4 | 0.00049 | 283 | 305 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C +C k+F k + ++H +++
XP_015881750.1 283 FVCRKCAKTFAVKGDWRTHEKNC 305
89*****************9987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MTDPYSNNVF NGWINFTHLH PHYYYSNPSL NFNQLPHQYA FPNKVININK SSIQTQRPFK 60
HVPPSSSPPL KALPLIDNLI RGSEGQDQEY ECSYSSSSAM EEEEDHIRNN NKDDINVGDG 120
NDGDKAYRNN VTVALNIGLP SPNSDDAGSS KMICSSSVDQ DVTDKDGANV VSSHPFERLN 180
KGQYWIPTPS QILIGPTQFS CPVCSKTFNR YNNLQMHMWG HGSQYRKGPD SLKGSQPTAM 240
LRLPCYCCSP GCKHNIDHPT SRPLKDFRTL QTHYKRKHGI KPFVCRKCAK TFAVKGDWRT 300
HEKNCGKIWY CICGSDFKHK RSLKDHMKAF GHGHGGFGID CPEDEDEPAS EIELDGEASI
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
