PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015881045.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 501aa    MW: 55188.9 Da    PI: 6.9845
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015881045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.3e-30113170260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +DgynWrKYGqK vkg+e+ rsYY+Ct+++C vkk++ers+ d+++v+++Y g+H+h+k
  XP_015881045.1 113 EDGYNWRKYGQKLVKGNEYVRSYYKCTHPNCLVKKQLERSH-DGQIVDTIYFGQHEHPK 170
                     7****************************************.***************85 PP
2WRKY103.61.1e-32287345159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d+kvv+ tYeg+H+h+
  XP_015881045.1 287 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDQKVVIATYEGQHDHD 345
                     58********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-27103171IPR003657WRKY domain
SuperFamilySSF1182906.93E-25106171IPR003657WRKY domain
PROSITE profilePS5081123.456107171IPR003657WRKY domain
SMARTSM007746.7E-34112170IPR003657WRKY domain
PfamPF031063.1E-23113169IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-35273347IPR003657WRKY domain
SuperFamilySSF1182906.41E-29279347IPR003657WRKY domain
PROSITE profilePS5081135.473282347IPR003657WRKY domain
SMARTSM007742.2E-37287346IPR003657WRKY domain
PfamPF031069.8E-26288344IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MVPEGETVTD EVASDKSQRR ENSINETHTS QETPSSRVSS LPPNEEGRSS FVKPEQATKV  60
QDSAVRAMSL NQEGKSSTMV LEKASKTPGT CVPASQSGQE SSTPTIIREK MTEDGYNWRK  120
YGQKLVKGNE YVRSYYKCTH PNCLVKKQLE RSHDGQIVDT IYFGQHEHPK PQLNIPVAVG  180
FVVSIVEERR DEPSLTTAED TPMDEHGQMP VRTERVDAPK ISNVAANDIG QGVLVQSNKI  240
KDEVFNDDDP DSKRRKKDKQ NVNSSSVDKP TSESRIVVQT LSEVDIVNDG YRWRKYGQKL  300
VKGNPNPRSY YRCSNPGCPV KKHVERASHD QKVVIATYEG QHDHDIPPVR TVTHNTTGSS  360
VLQIAHDDDA GTKTEDVAVC PPDRAHKTSD HESKSKDQLN GELKTRSGVS GVAASDKVTK  420
SCSGAETKSN EQQNGKPVIS EASSPVKVVE HSNSAVVSRP NDQVKGETRN KLEGNAVCHD  480
NLGPESKISE RQKPNAEPVH S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-37111348175WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253258RRKKDK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00094SELEXTransfer from AT2G04880Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015881045.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015881045.10.0WRKY transcription factor 1
TrEMBLA0A2P5ESE21e-180A0A2P5ESE2_TREOI; WRKY domain containing protein
STRINGXP_008229878.11e-169(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93583343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.23e-86zinc-dependent activator protein-1