 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_015879242.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 292aa MW: 32712.2 Da PI: 4.4541 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_015879242.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.1 | 8.4e-20 | 68 | 121 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++ +eq++ Le+ Fe ++++ e++++LAkklgL+ rq+ vWFqNrRa++k
XP_015879242.1 68 KKRRLAPEQVHLLEKSFEAENKLEPERKAQLAKKLGLQPRQIAVWFQNRRARWK 121
566899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 132.6 | 1.5e-42 | 67 | 158 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ eqv+lLE+sFe+e+kLeperK++la++Lglqprq+avWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ +++ ke+e+L++e+
XP_015879242.1 67 EKKRRLAPEQVHLLEKSFEAENKLEPERKAQLAKKLGLQPRQIAVWFQNRRARWKTKQLERDYDLLKSTYDSLLANYDSIAKENEKLKSEVI 158
69**************************************************************************************9985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001558 | Biological Process | regulation of cell growth |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MMESGRIFFD PTSGCQGGNM LFLGNSDPVF RGPRSIMGIE ETSKRRPFFS SPDELYDEEY 60
YDEQLPEKKR RLAPEQVHLL EKSFEAENKL EPERKAQLAK KLGLQPRQIA VWFQNRRARW 120
KTKQLERDYD LLKSTYDSLL ANYDSIAKEN EKLKSEVISL TEKLQAKDQQ AGAPVQAQNK 180
SEPIPGDMAD IVGSLHFNVK VEDRLSTGSG GSAVVDEESP VQLVDSGDSY FQSNQYPGGG 240
GGCVGPAVDG IHSEEDDGSD DSGRSYFSDV FAAAEQKQHE EGECLDWWPV WS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 115 | 123 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
