PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015876731.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ARR-B
Protein Properties Length: 710aa    MW: 78547.3 Da    PI: 7.5669
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015876731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like521.6e-16339399255
         G2-like   2 prlrWtpeLHerFveaveqLGGs.......ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      r++W+peLH +F  av+ LG +        +A Pk ilelm+ + +tl +v+SHLQkY++
  XP_015876731.1 339 SRVVWSPELHLKFTAAVSALGDKisslsfdPEARPKPILELMNSPNITLRQVASHLQKYKS 399
                     79******************8652222222479**************************86 PP
2Response_reg46.12.7e-16271331107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE.EEESTTTHHHHHHHHHT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpii.vvtahgeeedalealka 92 
                     +l+vd + + ++ l+++le+  + +v++++ ++ al +l+e++  + l++  +++p++d l++l  + +++  +p+i v++++ + ++a +al  
  XP_015876731.1  27 ILVVDNDTVSLMYLASMLEQYSF-KVTTTELASVALSILREQKeqYKLVIANMNLPDIDNLAFLHLLLKKD--IPVIqVMSSERNGNLAGKALAQ 118
                     89*********************.***************777777**********************8877..5555267799999********* PP

                     TESEEEESS--HHHH CS
    Response_reg  93 GakdflsKpfdpeel 107
                     Ga  fl Kp+  e+l
  XP_015876731.1 119 GACYFLQKPICLEDL 133
                     *********998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23005.2E-2123148No hitNo description
SuperFamilySSF521724.13E-2023147IPR011006CheY-like superfamily
SMARTSM004484.8E-1225137IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011027.0326141IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.7E-1327133IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.44E-1628134No hitNo description
Gene3DG3DSA:1.10.10.602.1E-19336404IPR009057Homeodomain-like
SuperFamilySSF466891.97E-11337403IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-13339399IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 710 aa     Download sequence    Send to blast
MCLKMDGNGM NFSVTKIVPK AANGLHILVV DNDTVSLMYL ASMLEQYSFK VTTTELASVA  60
LSILREQKEQ YKLVIANMNL PDIDNLAFLH LLLKKDIPVI QVMSSERNGN LAGKALAQGA  120
CYFLQKPICL EDLKFVWQHM YRKIRKPMKE VCEANIENKM NHGNDSRGIK IKETDNVSRA  180
PEKGNMIKEP GGVSGRPRCQ GIIIKEVNHA TRPPNYEGGK EVGGVSGSAT VCNLDGIQNR  240
YMVTDPNGKK KQFEGHQVSL VNENHVKVVQ NSCTKGSITT EQKKQEGLKT RRQIDDEEQQ  300
QQGKRTKVNS EQKSSQSLKT NEEEGERKDD SSSSNEKRSR VVWSPELHLK FTAAVSALGD  360
KISSLSFDPE ARPKPILELM NSPNITLRQV ASHLQKYKSQ VQKINETSTT DFLPVSKSTS  420
SYSKAEFPSL LERPSALASP LGQRSLSFGG RGSTQFTAPK SLAQPGPSLS SVINNHRTSN  480
LNSGQMDISR TLNLYPTNNN SNEVHIENHS MLQRSNQIRK TSSFNSNNFV NENMKEIQPY  540
QIQGSVSQVS ETNLPNLSYV IPEAASPCIS ADMSQLLNVP PYVNHAQEFA PDLAAPFNSQ  600
NQNQLSAGAM GRTDVLQSQP AQMTLGNATN IEKSPNDFFG GSQNVDPTPE QVAASGSNQN  660
QSLLDYANLL KFLEDDLEYN CLDSAPDIGD IDHYCKWLEQ TLHGKSKDPQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015876731.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015876731.10.0two-component response regulator ARR11 isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.12e-26pseudo-response regulator 6