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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_015875985.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
|
| Family |
C2H2 |
| Protein Properties |
Length: 357aa MW: 40315.9 Da PI: 7.9747 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_015875985.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.8 | 8.3e-05 | 195 | 214 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C k+F+r n++ H+
XP_015875985.1 195 FSCPLCFKTFNRYNNMQMHM 214
89*****************9 PP
|
| 2 | zf-C2H2 | 14.5 | 0.0001 | 279 | 301 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C +Cgk F + + ++H +++
XP_015875985.1 279 FMCRKCGKAFAVRGDWRTHEKNC 301
89*****************9987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MNDPYSNYFN GFLNLNSLPS FSSFTSSSNN PYFQSPNYDY NMICYNSIAI DNNTNTSFNH 60
FGSSSTSPPS PPLKEALPLL SLSPTRHDHN KNQQDHTNYL SATYEGDKIK MMINNKEKEE 120
SLHSSSSVDE TVTVALHLGL PSPSSADLVS RLSSTEISSD KEDVSVTSGC HSSTLNKGQY 180
WIPTPAQILI GPTQFSCPLC FKTFNRYNNM QMHMWGHGSQ YRKGPESLRG TQPTAMLRLP 240
CYCCAPGCRN NIDHPRSKPL KDFRTLQTHY KRKHGIKPFM CRKCGKAFAV RGDWRTHEKN 300
CGKLWYCTCG SDFKHKRSLK DHIKAFGHGH SAYGIDCFEE EDEAASEIEQ DNNDTNR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
