PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015875770.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 734aa    MW: 80415.4 Da    PI: 6.246
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015875770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.51.2e-32258314259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g Hnh 
  XP_015875770.1 258 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-DGQITEIIYKGAHNHA 314
                     7****************************************.***************7 PP
2WRKY101.84.1e-32474532159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe
  XP_015875770.1 474 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKCVITTYEGKHNHE 532
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-28251316IPR003657WRKY domain
PROSITE profilePS5081123.686252316IPR003657WRKY domain
SuperFamilySSF1182901.29E-25255316IPR003657WRKY domain
SMARTSM007748.9E-37257315IPR003657WRKY domain
PfamPF031063.5E-25258313IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-35459534IPR003657WRKY domain
SuperFamilySSF1182901.16E-27467534IPR003657WRKY domain
PROSITE profilePS5081137.493469534IPR003657WRKY domain
SMARTSM007742.7E-36474533IPR003657WRKY domain
PfamPF031062.1E-24475532IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    Send to blast
MEQDDNIVTS SSDDRKTLIP TTDEPMLAMM AAASSKAGAS IAERRAAKCG FNAERISTAR  60
FRTTSPLASP AARSPCLTIP PGISPTALLD SPIMLPNSQA LPSPTTGTFP LPSFYHESSI  120
LNSMTREDGD KGSFRFKPHG DVKHLSRHSS FENQQVEVDY QALVLEQPQM DFEFPAEFPG  180
EATSKYCVVN SSNDVKVSNS MIINANCVNQ QRCPVDMATD QTLLSREPTH HEDTGTDNLS  240
EGNQKGSYPS VGMVKTSEDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCQV KKKVERSHDG  300
QITEIIYKGA HNHAKPQPNR RAALGSTFSL DEMSEMGEGS GTCVKVEGGS VWTNIQSTTE  360
IRHGSEGRTD GLERTSSTSV ITDLSDPLST TQGKSVGVFE SAETPELSST LASHDDEEDG  420
ATQGSILLGE DADDEESESK RRKKECCLIE TNLASRAVRE PRVVVQIESE VDILDDGYRW  480
RKYGQKVVKG NPNPRSYYKC TSAGCSVRKH VERASHNLKC VITTYEGKHN HEVPAARNSN  540
HINSSSGNVP PAAANGQPSL TVRNAHIPKP ETQVQDLAPQ FDRKPEFSNE YLRPTFPGNF  600
ANDMKFGAPS IYQMKFPPLQ GVMSYASFGL NPNRNTTQQA GSIAPVMPDF PMSLPLNLPS  660
SGSLSMVGFD FNSGKQFASV QPILSGQQLQ ESDMKFLRPK QEQKDDNIYD ALATNASSLS  720
SSSVYNRVMG NFPP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-34246535178Probable WRKY transcription factor 4
2lex_A4e-34246535178Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015875770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015875770.10.0WRKY transcription factor SUSIBA2-like
TrEMBLA0A386IPT20.0A0A386IPT2_ZIZJJ; WRKY transcription factor 55
STRINGXP_008218446.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-105WRKY DNA-binding protein 2