PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015875614.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family BES1
Protein Properties Length: 270aa    MW: 28080.2 Da    PI: 5.797
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015875614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82238.63.9e-12159269150
          DUF822  69 yrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150
                     +  g+kp ++++++g s+sasp+ss+q        +sp++sy++sp+sssfpsp+s+  + +a+     +sl+p+l++ls+ sss+
  XP_015875614.1  15 FDVGCKPVDRMDIMGGSTSASPCSSYQ--------PSPCASYNPSPASSSFPSPVSSHYTANANGsadaNSLIPWLKNLSSGSSSA 92 
                     5679***********************........********************99887776557788**********9977664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.1E-131686IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MIMSQDIVRC LHLHFDVGCK PVDRMDIMGG STSASPCSSY QPSPCASYNP SPASSSFPSP  60
VSSHYTANAN GSADANSLIP WLKNLSSGSS SASSKFPHHL FVHGGSISAP VTPPLSSPTC  120
RTPRTKGDWD DPVAGANWAG QHYSLLPSST PPSPGRQVLP DSGWFAGLEI PQSGPSSPTF  180
SLVSRNPFGL KEAFSAGGSR MWTPGQSGTC SPAVAAGVDH TADVPMSDGI AAEFAFGSSA  240
TGLVKPWEGE TIEECVSDDL ELTLGNPRTR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015875614.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015875614.10.0BES1/BZR1 homolog protein 4 isoform X3
SwissprotQ9ZV882e-92BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498JVF11e-141A0A498JVF1_MALDO; Uncharacterized protein
STRINGXP_009351745.11e-141(Pyrus x bretschneideri)
STRINGXP_008371512.11e-141(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18890.11e-72BES1/BZR1 homolog 3