PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015869324.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 434aa    MW: 47877.1 Da    PI: 7.6316
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015869324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-3046103260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +DgynWrKYGqK vkg+e+ rsYY+Ct+++C vkk++ers+ d+++v+++Y g+H+h+k
  XP_015869324.1  46 EDGYNWRKYGQKLVKGNEYVRSYYKCTHPNCLVKKQLERSH-DGQIVDTIYFGQHEHPK 103
                     8****************************************.***************85 PP
2WRKY103.98.7e-33220278159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d+kvv+ tYeg+H+h+
  XP_015869324.1 220 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDQKVVIATYEGQHDHD 278
                     58********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-2736104IPR003657WRKY domain
SuperFamilySSF1182905.62E-2539104IPR003657WRKY domain
PROSITE profilePS5081123.45640104IPR003657WRKY domain
SMARTSM007746.7E-3445103IPR003657WRKY domain
PfamPF031062.5E-2346102IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-35206280IPR003657WRKY domain
SuperFamilySSF1182905.1E-29212280IPR003657WRKY domain
PROSITE profilePS5081135.473215280IPR003657WRKY domain
SMARTSM007742.2E-37220279IPR003657WRKY domain
PfamPF031068.0E-26221277IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MSLNQEGKSS TMVLEKASKT PGTCVPASQS GQESSTPTII REKMTEDGYN WRKYGQKLVK  60
GNEYVRSYYK CTHPNCLVKK QLERSHDGQI VDTIYFGQHE HPKPQLNIPV AVGFVVSIVE  120
ERRDEPSLTT AEDTPMDEHG QMPVRTERVD APKISNVAAN DIGQGVLVQS NKIKDEVFND  180
DDPDSKRRKK DKQNVNSSSV DKPTSESRIV VQTLSEVDIV NDGYRWRKYG QKLVKGNPNP  240
RSYYRCSNPG CPVKKHVERA SHDQKVVIAT YEGQHDHDIP PVRTVTHNTT GSSVLQIAHD  300
DDAGTKTEDV AVCPPDRAHK TSDHESKSKD QLNGELKTRS GVSGVAASDK VTKSCSGAET  360
KSNEQQNGKP VISEASSPVK VVEHSNSAVV SRPNDQVKGE TRNKLEGNAV CHDNLGPESK  420
ISERQKPNAE PVHS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-3844281175WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186191RRKKDK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00094SELEXTransfer from AT2G04880Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015869324.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015881045.10.0WRKY transcription factor 1
TrEMBLA0A2P5ESE21e-166A0A2P5ESE2_TREOI; WRKY domain containing protein
STRINGEMJ164831e-158(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93583343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.29e-87zinc-dependent activator protein-1