PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013903735.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
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Family | ERF | ||||||||
Protein Properties | Length: 329aa MW: 36376.1 Da PI: 4.8759 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.2 | 4.7e-09 | 52 | 96 | 1 | 50 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50 s+++GV++ + rW+A+ r + k slg f+ +e+Aa+a+++++ XP_013903735.1 52 SRFRGVHQTFPTRRWEAQFRR------SgKPTSLGCFDREEDAARAYDRMM 96 789***************766......34*******************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 7.19E-9 | 52 | 98 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 8.4E-5 | 52 | 97 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-7 | 53 | 115 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.4E-5 | 53 | 122 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 11.232 | 53 | 116 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MSARSLPPSI TCGPAPAPQR EGADLLEGIG QRAKAGGRYS KPGVASGRTF TSRFRGVHQT 60 FPTRRWEAQF RRSGKPTSLG CFDREEDAAR AYDRMMLWVE MHGAGPATKA GVTNFDVSQY 120 AEDLPWLAGV TQDELIEALR TEGRKQASTR ARPVPSSGAT TGAAARAGST TPEPESEWGG 180 DDDDDDEESG ARNKRRRVSQ GLNGSQQQHQ QQQEEQEQEQ EQQQQQKLLD APSDDQQRQQ 240 QQGDGPVDMQ ERWQQQLYSQ AEQGTVSGLG VVTEAPQLLV PTALQLLLLL LLLLLLLLLL 300 LLLLLLLLLL LLLLLLLLLM LLRLLLQVW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 193 | 197 | KRRRV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013903735.1 | 0.0 | hypothetical protein MNEG_3248 | ||||
TrEMBL | A0A0D2NIG7 | 0.0 | A0A0D2NIG7_9CHLO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP2746 | 14 | 14 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 6e-08 | AINTEGUMENTA-like 5 |
Link Out ? help Back to Top | |
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Entrez Gene | 25736126 |
Publications ? help Back to Top | |||
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