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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013901402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
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Family | bZIP | ||||||||
Protein Properties | Length: 163aa MW: 18200.1 Da PI: 10.0029 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.9 | 3.3e-11 | 11 | 69 | 3 | 61 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 e++r rr+q+NRe+ArrsR+RK++ ++ Le+ + + + +++ + +++e + + +l++ XP_013901402.1 11 EVRRMRRMQSNRESARRSRKRKQEHLQTLEQQLEDMLSRMQDAQARADEAERRALALED 69 789************************************99999999988877777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-8 | 9 | 73 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.9E-9 | 10 | 61 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.967 | 11 | 74 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.2E-10 | 12 | 71 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-8 | 13 | 71 | No hit | No description |
CDD | cd14702 | 1.32E-7 | 14 | 63 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 16 | 31 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MEDMTGLDKN EVRRMRRMQS NRESARRSRK RKQEHLQTLE QQLEDMLSRM QDAQARADEA 60 ERRALALEDQ LGRARDEIER LGGDPAPHEV RNGGGQPSIE EQPAPGPGLK RQRKQQQPAA 120 ALAGDALDAR HHDPAPAAKR GKQNGGALNG RRRVSSSGDE ESE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 31 | RRSRKRK |
2 | 25 | 32 | RRSRKRKQ |
3 | 27 | 32 | SRKRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013901402.1 | 1e-110 | hypothetical protein MNEG_5580 | ||||
TrEMBL | A0A0D2JTX4 | 1e-109 | A0A0D2JTX4_9CHLO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP5228 | 8 | 9 |
Link Out ? help Back to Top | |
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Entrez Gene | 25738457 |
Publications ? help Back to Top | |||
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