 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_013633155.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
M-type_MADS |
Protein Properties |
Length: 344aa MW: 39726.4 Da PI: 5.6092 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_013633155.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 62.8 | 3.8e-20 | 16 | 64 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + +++ R+ +i+KKA+EL +LCd+e++vi ++++g++++++
XP_013633155.1 16 SSSSYSLAATSLKSRLLTIFKKAQELTTLCDIEACVIHYGPDGEMRTWP 64
799*********************************************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MRPPRSSSCS KCSSASSSSY SLAATSLKSR LLTIFKKAQE LTTLCDIEAC VIHYGPDGEM 60 RTWPENRDIV RSLALRYIQL DQAKRRKKSV NLYEFLNKNK DKKTMLNKFK KRNVEELKYP 120 ISDHYSPDQI NQLIHSLELS YSTLQERRRF LAAKANLEDR QHSMNPSQFT PLPQELYVND 180 KNNTFQHLCV SDYSEVQESA LRYQLMPYGG YDQNMCMGNI NNVQHPWVSN AQPPELQEPN 240 QLMQHEPYGF DQNMCMGDTT NSCNVVDPCL PNMLPDDFCF DFQDPYGGNM VGNPSFSQDF 300 FPDMTSSYVY EADYFRNLLY HLSSSNIPND NSEISSNLPD DHRE
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |