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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_013633151.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 332aa MW: 38358 Da PI: 6.4987 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_013633151.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 63 | 3.3e-20 | 17 | 65 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + +++ R+ +i+KKA+EL +LCd+e++vi ++++g++++++
XP_013633151.1 17 SSSSYSLAATSLKSRLLTIFKKAQELTTLCDIEACVIHYGPDGEMRTWP 65
799*********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MRSPRSSSCS KCSSSSSSSS YSLAATSLKS RLLTIFKKAQ ELTTLCDIEA CVIHYGPDGE 60 MRTWPENRDI VRSLALRYIQ LDQAKRRKKS VNLYEFLNKN KEKKKMIDNF KKAKRNVEEL 120 KYPISDHYTP DQINQLIHSL ELSYSKLQER RRFLAAKANL DDRQHSLNPN HFTKYPQESC 180 VYDQNNNNYN FQHLCLSDYS TLHYQLMPYG GSDQNMMCMV NNFQHPCVSS NTTDYSVFPL 240 ELQESVSNYE LNQLMPHELN YGFDQNMCMA DTTNSCNVED PCLSDDFCFD FQDPYSGFMV 300 GNPSFSHDFN PVMSSSYVDE NRLLQASTLP SL
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |