 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_013627204.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
C2H2 |
| Protein Properties |
Length: 195aa MW: 22214.9 Da PI: 7.6297 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013627204.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.1 | 0.00014 | 97 | 119 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C + F ++ L H++ H
XP_013627204.1 97 FSCNYCQRKFYSSQALGGHQNAH 119
89******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MSFEETYTHL YTLYIRPLMP ETFKHTSLFL IISLTSLFSL TKHLGMDFQP NTSLRLSLPS 60
YKNHQLNLEL VLDPSSMSSS SSSSTNSSSC LEQPRVFSCN YCQRKFYSSQ ALGGHQNAHK 120
LERTLAKKSR ELFRSSTTVD VDQPYPFSGR FELYGRGYEG FVESGGPRDF SGRRVPESGI 180
DQDQEMSHLD LSLRL
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Highly expressed at in the abscission zone (AZ) of petals, stamens, sepals and siliques. Expressed at lower levels in stamens, carpels, cotyledons, major veins of rosette leaves, trichomes of inflorescence leaves and stems. {ECO:0000269|PubMed:18192438}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in the regulation of floral organ abscission. Participates in processes that directly or indirectly influence shedding of floral organs. {ECO:0000269|PubMed:18192438}. |
