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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_013624242.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 349aa MW: 39925.7 Da PI: 9.0647 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_013624242.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 62.5 | 4.9e-20 | 23 | 60 | 13 | 50 |
HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
++kR++ ++KKA+ELS+LC++ev+vi+++s+g+l++++
XP_013624242.1 23 LTKRQENVFKKANELSILCGVEVCVIYYGSNGELKTWP 60
79***********************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MASYSSSSSS LFKKPSSSEA KRLTKRQENV FKKANELSIL CGVEVCVIYY GSNGELKTWP 60 EDREKVKDMA RRYSELSEAK REVKQYDLDL FLESIKKDND SKNKKKKKKR AKLGSSYKYP 120 DWHPRFDKYS VEQLEVLIQS LERSQTMMQH RLRAVVESQR QRNMHYTNMA GQEQIMVPER 180 SNQASMNLFN HGNSTLPQSQ ASISASNQAY SLAPLPNSLT IHQDPNMEMY SRLLASQGAG 240 MNEVFNTSML PYNGFNTNCL NGFSNQFYQN CFEVEDPYGV QGAGINNNMK VEDYSGLLWT 300 QGTGMNGLQN GYNSNNNNTN GYPHQLVQTP PVYQYMDRST QSVRPLYEI
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 103 | 109 | KKKKKKR |
2 | 105 | 112 | KKKKRAKL |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |