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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_013617177.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
G2-like |
| Protein Properties |
Length: 325aa MW: 36606.2 Da PI: 6.7519 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013617177.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 99.9 | 1.7e-31 | 188 | 242 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
+r+rW++eLH++Fv+a+++LGGs++AtPk+i+++mkv+gLt+++vkSHLQkYR++
XP_013617177.1 188 QRRRWSQELHRKFVDALHSLGGSQVATPKQIRDMMKVDGLTNDEVKSHLQKYRMH 242
8****************************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MVQTDTDKMG LNLNLSMYSL AKPLSQFLDE VSRIKDYDSK LSEIDGYVGK LEEERKKIDV 60
FKRELPLCML LLNEAIETLK EEASSSVMMA SDGKLDVGEG AKVESDNKKN WMSSAQLWIS 120
NPNSQLQSTN EKEDRSVTHK PIQGGAFSSF NLPPAPLSLG TPASEILMDY NHQFSKPMQS 180
LHSQKKEQRR RWSQELHRKF VDALHSLGGS QVATPKQIRD MMKVDGLTND EVKSHLQKYR 240
MHIRKHPLHP AKTLSSSDQH VVLDKETQSL ISLTRSDSPQ SPLIDGGLFS NNGHSSEEAE 300
DEEKSDGRSW KSVSNKKKQG LDLEL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-14 | 189 | 240 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, inflorescence apex, floral primordia, stamen primordia, carpel primordia and ovules. {ECO:0000269|PubMed:26903506}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ973839 | 0.0 | DQ973839.1 Brassica napus clone PBCESTNA15 microsatellite sequence. |
