 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_013613614.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
M-type_MADS |
| Protein Properties |
Length: 342aa MW: 39314.7 Da PI: 9.9229 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013613614.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 73.6 | 1.6e-23 | 6 | 55 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+++++s + +++s+R+++i+KKA+ELS+LC++ v vi+++++g+l+++++
XP_013613614.1 6 SSSSNSLAATSLSNRLKTIFKKASELSILCQVAVNVIYYGPNGELKTWPK 55
78999*******************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MRASSSSSSN SLAATSLSNR LKTIFKKASE LSILCQVAVN VIYYGPNGEL KTWPKEKEVV 60
KDMALRYKAA TKRKKSSNLR DFLEGKLEND KNLKKNKKKT KREFENVKYP EWYPVLDHYS 120
PDQLHELVLS LQGTLSTMEE RIRVLEAKKQ KNTNLVHQNL TQQRHHQHQT VQPLNPSQYS 180
LYLFNRDDAT LSQLPLSASH SKQLISYQNQ LRMQQQRLYD PCVSNTQGHP ALLTVQESWL 240
KNQLMQQQEP YGSHHNMRTM NNTTNSKVLG HPCPLNTIPK EFSFDLQKNP NDDMVGRPKF 300
SQDMLNLCLA YADSPQLQTS SLPSIHQTIP NINLIPDNSR CL
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 93 | 101 | KKNKKKTKR |
