 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_013609675.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
Family |
ERF |
Protein Properties |
Length: 383aa MW: 42075.1 Da PI: 8.8583 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_013609675.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.5 | 9.4e-20 | 176 | 225 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W AeIrd + + +r++lg+f+ ae Aa+a+++a+++++g
XP_013609675.1 176 RYRGVRQRP-WGKWTAEIRDpF-----KaARVWLGTFDNAESAARAYDEAALRFRG 225
7********.**********66.....56*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006970 | Biological Process | response to osmotic stress |
GO:0009749 | Biological Process | response to glucose |
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
GO:0050832 | Biological Process | defense response to fungus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MCALKVANQE DNVGKKAEPT TREDDDHRTL SDIDQWLYSF SAEDDHLHRH NSLTPPSSSL 60 SISREKEMSA IVSALTHVVA GNVPTRQYGG EGTSNSSSSP GQKRRREVEE GGGGGKDVKA 120 ANTLTVDQYF SGGSSSFKVG EASSHMSGLV PTYEYTTTPN VNTETLLLSG DGPQRRYRGV 180 RQRPWGKWTA EIRDPFKAAR VWLGTFDNAE SAARAYDEAA LRFRGNKAKL NFPENVKLVR 240 PASTAPTLSV QQTTVQRPTQ LRNSGSTSTL LPVRHASDQN VHSQLLMQSY NFSHLELAHH 300 QQQFQHQQQS LYDQVSFPLR FGHTGGSTMQ PTSTSSSRST SMFSPAAVQP KLESASETDR 360 LQDLQSLGKA SNNNNNYNNS PSS
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Ubiquitous with lower levels in seeds and siliques. {ECO:0000269|PubMed:16227468}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Negative regulator of the abscisic acid (ABA) signaling pathway involved in seed germination and in responses to stress conditions. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16227468}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and stresses, including cold, drought and salt (PubMed:16227468, PubMed:26961720). Triggered by YY1 (PubMed:26961720). {ECO:0000269|PubMed:16227468, ECO:0000269|PubMed:26961720}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JQ713825 | 0.0 | JQ713825.1 Brassica juncea ethylene-responsive transcription factor ABR1 mRNA, complete cds. |
Publications
? help Back to Top |
- Choi DS,Hwang BK
Proteomics and functional analyses of pepper abscisic acid-responsive 1 (ABR1), which is involved in cell death and defense signaling. Plant Cell, 2011. 23(2): p. 823-42 [PMID:21335377] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Li T,Wu XY,Li H,Song JH,Liu JY
A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network. Mol Plant, 2016. 9(5): p. 650-661 [PMID:26961720] - Sanyal SK, et al.
Arabidopsis CBL interacting protein kinase 3 interacts with ABR1, an APETALA2 domain transcription factor, to regulate ABA responses. Plant Sci., 2017. 254: p. 48-59 [PMID:27964784] - Choi SW,Lee SB,Na YJ,Jeung SG,Kim SY
Arabidopsis MAP3K16 and Other Salt-Inducible MAP3Ks Regulate ABA Response Redundantly. Mol. Cells, 2017. 40(3): p. 230-242 [PMID:28292003]
|