PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013608117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | EIL | ||||||||
Protein Properties | Length: 605aa MW: 68550.2 Da PI: 5.3453 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 495.8 | 2.3e-151 | 51 | 409 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa.tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 +el++rmw+d+m+lkrlke+++++ +k+ +++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipe+gkpv+gasd+Lr+W XP_013608117.1 51 DELERRMWRDKMRLKRLKEQQQDNKSSKQGVdYDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREW 145 79*******************9987777765699************************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT CS EIN3 95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskd 189 Wk+kv+fdrngpaai+kyqa+n++++ +s+ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+Gke+ww +lgl kd XP_013608117.1 146 WKDKVRFDRNGPAAIAKYQAENNVPGVCESNGL-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPSGKEDWWCQLGLGKD 239 *************************98877766.9************************************************************ PP --.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX..XXXX.XXXXXXXXXX CS EIN3 190 qgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss..slrk.qspkvtlsce 279 qg+ pykkphdlkkawkv+vLtavikhm p++ +ir+l+rqsk+lqdkm+akes+++l+++nqee+++++++++ ++ sl+ ++ ++ +++ XP_013608117.1 240 QGPAPYKKPHDLKKAWKVGVLTAVIKHMFPDVGKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPEscPPlsSLSGgGNCSLLMNDC 334 **************************************************************************65226544446999999**** PP XXXXXX...XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 280 qkedve...gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 ++dve ++ + ++++v+ vk++ + ++ rkrk +++ +a ++ + + tc++ + +se + +f d+ns+++++ XP_013608117.1 335 GQYDVEgfeKETRYEVEEVKPVKEEVSSEFMRKRKPNRDLNAVMERT--VFTCENPGCVHSEISRGFLDRNSRDNHQ 409 ******86555555667788888888999*****9666666666544..7*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.1E-129 | 51 | 304 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.2E-73 | 180 | 314 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.09E-60 | 183 | 307 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence Send to blast |
MMFNEMGMLG GNVDFYSCSS LGELDLCPAP QPELDSIVED DYTDDDEIDV DELERRMWRD 60 KMRLKRLKEQ QQDNKSSKQG VDYDSAKQRQ SQEQARRKKM SRAQDGILKY MLKMMEVCKA 120 QGFVYGIIPE NGKPVTGASD NLREWWKDKV RFDRNGPAAI AKYQAENNVP GVCESNGLIG 180 PTPHTLQELQ DTTLGSLLSA LMQHCDPPQR RFPLEKGVPP PWWPSGKEDW WCQLGLGKDQ 240 GPAPYKKPHD LKKAWKVGVL TAVIKHMFPD VGKIRKLVRQ SKCLQDKMTA KESATWLAII 300 NQEEALAREL YPESCPPLSS LSGGGNCSLL MNDCGQYDVE GFEKETRYEV EEVKPVKEEV 360 SSEFMRKRKP NRDLNAVMER TVFTCENPGC VHSEISRGFL DRNSRDNHQL GCPHRDSCVL 420 YGAGPSRFHV NEVKPVVGFS QPRPVNSVDQ PIDLTGIGVP EDGQKMISEL MSMYDRNVQS 480 NQTPMVMENQ NVSLLQPMVQ NQFQGNMVEG GFFEEFNIPN RAKNNNSSNQ MFFQGNNNGF 540 NYDTAHNNNF EVAHNNSSSN RFQGVYDSAP FDMASLVYRD DMSVPGVVGT MDGMQQKQHD 600 VSMWF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 5e-87 | 182 | 314 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 5e-87 | 182 | 314 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Bol.3727 | 0.0 | leaf |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013608117.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013608113.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_013608117.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_013678568.1 | 0.0 | protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_013678569.1 | 0.0 | protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A0D3AC06 | 0.0 | A0A0D3AC06_BRAOL; Uncharacterized protein | ||||
STRING | Bo1g108650.1 | 0.0 | (Brassica oleracea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |