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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_013592561.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family |
M-type_MADS |
Protein Properties |
Length: 344aa MW: 39502.4 Da PI: 8.2359 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_013592561.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 65 | 7.6e-21 | 23 | 68 | 6 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+s + +++kR+ +++KKAeELS+LC++ev+vi ++s+g+l+++++
XP_013592561.1 23 SSLKAASLAKRQVTVFKKAEELSILCGVEVCVICYGSDGELRTWPK 68
677889**************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MSSSLSKTTK VSQFRPTLFQ KASSLKAASL AKRQVTVFKK AEELSILCGV EVCVICYGSD 60 GELRTWPKDR EKVKDMALRY SQLSEVKRRI KQWDLDKFLE EVNKDPKKKN KKKKVKLESS 120 YEYPDWDPMF DNCSVEQLTE LIQSLERKET IMQDRLRAVV ESQRQRSMRY VNMSNQEPTQ 180 MNHLQQQLPD QAQSLAPLPN SLTVYQYPNM DDMYSSFLGG QETGRNEFLS TNMIPYNSFN 240 SNCVNMFQNQ FNQNCSKVED YSGFPQGTGI NNMNVEDYSG ALWAQGTNGL QNMDMYGYNN 300 NSNTNGFSHQ LVQFPAQRAA PACQYVDGST QNIRPQFQYS SFVG
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |